pyhf.infer.hypotest#

pyhf.infer.hypotest(poi_test, data, pdf, init_pars=None, par_bounds=None, fixed_params=None, calctype='asymptotics', return_tail_probs=False, return_expected=False, return_expected_set=False, return_calculator=False, **kwargs)[source]#

Compute \(p\)-values and test statistics for a single value of the parameter of interest.

See AsymptoticCalculator and ToyCalculator on additional keyword arguments to be specified.

Example

>>> import pyhf
>>> pyhf.set_backend("numpy")
>>> model = pyhf.simplemodels.uncorrelated_background(
...     signal=[12.0, 11.0], bkg=[50.0, 52.0], bkg_uncertainty=[3.0, 7.0]
... )
>>> observations = [51, 48]
>>> data = pyhf.tensorlib.astensor(observations + model.config.auxdata)
>>> mu_test = 1.0
>>> CLs_obs, CLs_exp_band = pyhf.infer.hypotest(
...     mu_test, data, model, return_expected_set=True, test_stat="qtilde"
... )
>>> CLs_obs
array(0.05251497)
>>> CLs_exp_band
[array(0.00260626), array(0.01382005), array(0.06445321), array(0.23525644), array(0.57303621)]
Parameters:

  • poi_test (Number or Tensor) – The value of the parameter of interest (POI)

  • data (Number or Tensor) – The data considered

  • pdf (Model) – The statistical model adhering to the schema model.json

  • init_pars (tensor of float) – The starting values of the model parameters for minimization.

  • par_bounds (tensor) – The extrema of values the model parameters are allowed to reach in the fit. The shape should be (n, 2) for n model parameters.

  • fixed_params (tuple or list of bool) – The flag to set a parameter constant to its starting value during minimization.

  • calctype (str) – The calculator to create. Choose either ‘asymptotics’ (default) or ‘toybased’.

  • return_tail_probs (bool) – Bool for returning \(\mathrm{CL}_{s+b}\) and \(\mathrm{CL}_{b}\)

  • return_expected (bool) – Bool for returning \(\mathrm{CL}_{\mathrm{exp}}\)

  • return_expected_set (bool) – Bool for returning the \((-2,-1,0,1,2)\sigma\) \(\mathrm{CL}_{\mathrm{exp}}\) — the “Brazil band”

  • return_calculator (bool) – Bool for returning calculator.

Returns:

Tuple of Floats and lists of Floats and a AsymptoticCalculator or ToyCalculator instance:

  • \(\mathrm{CL}_{s}\): The modified \(p\)-value compared to the given threshold \(\alpha\), typically taken to be \(0.05\), defined in [1007.1727] as

\[\mathrm{CL}_{s} = \frac{\mathrm{CL}_{s+b}}{\mathrm{CL}_{b}} = \frac{p_{s+b}}{1-p_{b}}\]

to protect against excluding signal models in which there is little sensitivity. In the case that \(\mathrm{CL}_{s} \leq \alpha\) the given signal model is excluded.

  • \(\left[\mathrm{CL}_{s+b}, \mathrm{CL}_{b}\right]\): The signal + background model hypothesis \(p\)-value

\[\mathrm{CL}_{s+b} = p_{s+b} = p\left(q \geq q_{\mathrm{obs}}\middle|s+b\right) = \int\limits_{q_{\mathrm{obs}}}^{\infty} f\left(q\,\middle|s+b\right)\,dq = 1 - F\left(q_{\mathrm{obs}}(\mu)\,\middle|\mu'\right)\]

and 1 minus the background only model hypothesis \(p\)-value

\[\mathrm{CL}_{b} = 1- p_{b} = p\left(q \geq q_{\mathrm{obs}}\middle|b\right) = 1 - \int\limits_{-\infty}^{q_{\mathrm{obs}}} f\left(q\,\middle|b\right)\,dq = 1 - F\left(q_{\mathrm{obs}}(\mu)\,\middle|0\right)\]

for signal strength \(\mu\) and model hypothesis signal strength \(\mu'\), where the cumulative density functions \(F\left(q(\mu)\,\middle|\mu'\right)\) are given by Equations (57) and (65) of [1007.1727] for upper-limit-like test statistic \(q \in \{q_{\mu}, \tilde{q}_{\mu}\}\). Only returned when return_tail_probs is True.

Note

The definitions of the \(\mathrm{CL}_{s+b}\) and \(\mathrm{CL}_{b}\) used are based on profile likelihood ratio test statistics. This procedure is common in the LHC-era, but differs from procedures used in the LEP and Tevatron eras, as briefly discussed in \(\S\) 3.8 of [1007.1727].

  • \(\mathrm{CL}_{s,\mathrm{exp}}\): The expected \(\mathrm{CL}_{s}\) value corresponding to the test statistic under the background only hypothesis \(\left(\mu=0\right)\). Only returned when return_expected is True.

  • \(\mathrm{CL}_{s,\mathrm{exp}}\) band: The set of expected \(\mathrm{CL}_{s}\) values corresponding to the median significance of variations of the signal strength from the background only hypothesis \(\left(\mu=0\right)\) at \((-2,-1,0,1,2)\sigma\). That is, the \(p\)-values that satisfy Equation (89) of [1007.1727]

\[\mathrm{band}_{N\sigma} = \mu' + \sigma\,\Phi^{-1}\left(1-\alpha\right) \pm N\sigma\]

for \(\mu'=0\) and \(N \in \left\{-2, -1, 0, 1, 2\right\}\). These values define the boundaries of an uncertainty band sometimes referred to as the “Brazil band”. Only returned when return_expected_set is True.

  • a calculator: The calculator instance used in the computation of the \(p\)-values. Either an instance of AsymptoticCalculator or ToyCalculator, depending on the value of calctype. Only returned when return_calculator is True.

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